Ex parte MEZES et al. - Page 6




                 Appeal No. 1996-2013                                                                                                               
                 Application No. 07/935,695                                                                                                         
                          The invention thus can provide intact biosynthetic antibody binding sites                                                 
                          analogous to V -V  dimers, either non-covalently associated, disulfide                                                    
                                             H   L                                                                                                  
                          bonded, or preferably linked by a polypeptide sequence to form a composite                                                
                          V -V  or V -V  polypeptide . . . The invention also provides proteinsH   L      L  H                                                                                                         
                          analogous to an independent V  or V  domain, or dimers thereof.H      L                                                                          
                 Further, on page 26 (references to figures omitted), Huston teaches that:                                                          
                          The linker 12 should be long enough . . . to permit the chains to assume their                                            
                          proper conformation . . . [T]he linker may comprise an amino acid sequence                                                
                          patterned after a hinge region of an immunoglobulin . . . The linker may also                                             
                          include one or two built in cleavage sites . . . This strategy permits the V  and                                         
                                                                                                                      H                             
                          V -like domains to be separated after expression, or the linker to be excised                                             
                            L                                                                                                                       
                          after folding while retaining the binding site structure in non-covalent                                                  
                          association.                                                                                                              
                          On page 28, Huston discloses a linked pair of BABS, i.e., a dimer of single chain                                         
                 polypeptides.  We cannot agree with the examiner’s conclusion that these are “dimeric                                              
                 single chain antibody fragments which are non-covalently dimerized” (Examiner’s Answer,                                            
                 page 4, emphasis added).  The BABS are linked through a spacer, which “may be an                                                   
                 amino acid sequence analogous to the linker sequence [ ] or it may take other forms.”                                              
                 According to Huston, “the spacer’s primary function is to separate the active protein                                              
                 regions to promote their independent bioactivity and permit each region to assume its                                              
                 bioactive conformation independent of interference from its neighboring structure” (page                                           
                 28).  This does not describe the non-covalent linkage between individual single chain                                              
                 polypeptides required by the claims on appeal.                                                                                     
                          This deficiency in the primary reference is not remedied by any of the secondary                                          
                 references.  In our judgment, the combined disclosures of the cited references are not                                             


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