Ex Parte CASTRO - Page 5



              Appeal No. 2003-0892                                                                  Page 5                
              Application No. 09/454,385                                                                                  
              readily” (Brief, pages 5-6).  The examiner does not disagree.                                               
                     Thus, the teachings of the Mandecki and Albrecht do not appear to be in dispute.                     
              Rather the dispute is one of claim construction.  According to the examiner, “the claim                     
              is open to . . . detection of every fluorophore and every reporter simultaneously”                          
              (Answer, page 8), and “detection of multiple different molecules along with the single                      
              molecule” (id., page 7) is permitted.  We disagree.                                                         
                     The claimed method requires “identifying single molecules having a given target                      
              DNA or RNA sequence” (claim 1) by selecting a primer complementary to the target                            
              sequence; hybridizing the primer to the target sequence; forming a fluorescent reporter                     
              molecule by extending the primer along the target sequence, in a manner                                     
              complementary to the target sequence, by progressively binding a plurality of                               
              nucleotides, some of which are fluorophore-labeled, to the primer; and detecting the                        
              fluorescent target/reporter molecule by flow cytometry or single molecule                                   
              electrophoresis.  While it may be, as the examiner argues, that there is “no requirement                    
              that the detection proceed without detecting additional molecules” (Answer, page 7),                        
              each target molecule must be detected as an individual entity - we see nothing in the                       
              claim which is open to detection of an aggregate of multiple target molecules.                              
                     Inasmuch as neither Mandecki nor Albrecht detects a signal from an individual,                       
              discrete reporter molecule, neither reference meets every limitation of the claim 1, the                    
              broadest claim on appeal.  Accordingly, we find that neither reference anticipates the                      
              claims, and we reverse the rejection of the claims over Mandecki, as well as the                            
              rejection of the claims over Albrecht.                                                                      
              Obviousness                                                                                                 
                     Conrad describes “fluorescent structural analogs of the non-fluorescent                              




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