Ex Parte Friddle et al - Page 17


                Appeal No. 2005-0731                                                                       Page 17                             
                Application No. 09/974,712                                                                                                     

                polynucleotides (or a part of it) to a solid substrate, in combination with other                                              
                polynucleotides, to form a DNA chip, and that such a DNA chip could be used to                                                 
                monitor changes in expression of the corresponding gene.  However, the specification                                           
                provides no guidance to allow a skilled artisan to use data relating to the expression of                                      
                the gene comprising SEQ ID NO:1 in any practical way.  The specification provides no                                           
                guidance regarding what the SEQ ID NO:1-specific information derived from a DNA chip                                           
                would mean.                                                                                                                    
                         For example, assume that a fragment of SEQ ID NO:1 was attached to a DNA                                              
                chip and the researcher observed that expression of the corresponding gene was                                                 
                increased when a cell was treated with a particular agent.  The specification provides no                                      
                basis on which a skilled worker would be able to determine what, if anything, that result                                      
                means.  Perhaps a change in expression of the gene would mean different things,                                                
                depending on other factors, but again the specification provides no hint what other                                            
                factors might be important.  Would it depend on what agent is used, what cell type is                                          
                used, the behavior of other genes (if so, which genes and what behavior is significant),                                       
                or the degree of increase?  Because the specification provides no information about the                                        
                activity of the protein encoded by SEQ ID NO:1, it provides no guidance as to how to                                           
                interpret the results of a DNA chip-based gene expression assay based on the claimed                                           
                polynucleotides.                                                                                                               
                         The same problem afflicts Appellants’ assertions that the claimed polynucleotides                                     
                can be used to map a particular chromosomal locus or to define the exon splice-                                                
                junctions of the genomic gene:  the specification provides no meaningful guidance                                              
                regarding how to use such information in any practical way.  What would it mean, for                                           





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