Ex Parte Wagner - Page 6


              Appeal No. 2005-2663                                                               Page 6                
              Application No. 10/140,323                                                                               

              indefinite because said list of G does not list the longest path as required by the                      
              recursive algorithm of claim 4 for determining a list of the longest path.”  Examiner’s                  
              Answer, pages 3-4.                                                                                       
                     The examiner’s concern seems to be that the algorithm set out in claim 6 defines                  
              a variable G to be “the genetic network graph” while the preamble of claim 1 states that                 
              the method “determin[es] . . . genetic interactions in a graph representation of a genetic               
              network.”  The examiner argues that, while “the meaning of the phrase ‘graph                             
              representation of a genetic network’ overlaps somewhat with the meaning of the phrase                    
              ‘genetic network graph’[,] . . . [they are not] identical to clearly define the metes and                
              bounds of the claimed invention.”  Examiner’s Answer, page 4.                                            
                     Appellant argues that “the terms ‘graph representation of a genetic network’ and                  
              ‘genetic network graph,’ as they are used in this patent application, are synonymous.                    
              Appellant respectfully submits that persons having ordinary skill in the art would have no               
              trouble discerning that these two terms mean the same thing.”  Appeal Brief, page 8.                     
                     We will reverse this rejection.  “The definiteness inquiry focuses on whether                     
              those skilled in the art would understand the scope of the claim when the claim is read                  
              in light of the rest of the specification.”  Union Pacific Resources Co. v. Chesapeake                   
              Energy Corp., 236 F.3d 684, 692, 57 USPQ2d 1293, 1297 (Fed. Cir. 2001).  Claims are                      
              in compliance with 35 U.S.C. § 112, second paragraph, if “the claims, read in light of the               
              specification, reasonably apprise those skilled in the art and are as precise as the                     



                                                                                                                       
              “strong component” before applying the algorithm that calculates the adjacency list of the network.  Page
              13.                                                                                                      





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