Ex Parte Brookes - Page 9


                  Appeal No.  2006-0258                                                              Page 9                    
                  Application No.  09/755,747                                                                                  
                          According to appellant (Brief, page 13, emphasis removed), “the probe                                
                  DNA is explicitly stated in Jordan et al. as forming a “probe DNA monolayer.”                                
                  (See Jordan et al., page 4940, right-hand column, middle of first full paragraph.)”                          
                  In response, the examiner finds (Answer, page 17), “[a]ppellant ignores the plain                            
                  statement of Jordan that “[t]he SPR signal resulted from hybridization onto                                  
                  immobilized probes is further amplified by the formation of streptavidin/DNA                                 
                  multilayers which grow by a combination of DNA hybridization and biotin-                                     
                  streptavidin binding (see abstract of Jordan).”  Upon review of Jordan, we find                              
                  that these statements by the examiner and appellant are both correct and are not                             
                  in conflict.  Further, while Jordan refers to immobilization on a gold surface and                           
                  not a microtiter plate, we believe that some explanation is necessary to dispel the                          
                  conflict created on this record.   With reference to figure 1 of Jordan, we note that                        
                  a “probe monolayer” is formed by adsorbing probe DNA onto the gold surface.                                  
                  Notwithstanding any other step, this first step of adsorbing probe DNA onto the                              
                  gold surface results in the formation of a “probe monolayer.”  Accordingly,                                  
                  appellant is correct.  Now, in a subsequent step, biotinylated complements (e.g.                             
                  biotinylated DNA) is hybridized to the probe DNA monolayer.  Jordon, page                                    
                  1440, second column, first full paragraph.  The result is a probe DNA –                                      
                  biotinylated complements multilayer.  Accordingly, the examiner is correct.                                  
                          For illustrative purposes, let’s consider this analysis in the context of a                          
                  streptavidin coated microtiter plate.  Assume that a monolayer of streptavidin is                            
                  coated onto a microtiter plate.  Then single DNA strands are attached to the                                 
                  microtiter plate using streptavidin as a linker.  For clarity, this means that each                          







Page:  Previous  2  3  4  5  6  7  8  9  10  11  12  13  14  15  16  Next 

Last modified: November 3, 2007