Ex Parte Hogan - Page 6


              Appeal No. 2006-1517                                                                   Page 6                 
              Application No. 09/976,423                                                                                    

              detecting those alleles are the same regardless of whether the resulting genomic profile                      
              is used as recited in claim 106; the intended use language at the end of the claim                            
              therefore does not constitute a structural limitation of the claimed kit.                                     
                     Claim 106 differs from claim 72 in that it does not require the claimed kit to                         
              comprise a computer program in addition to the component parts that detect the                                
              presence of variant alleles.                                                                                  
              2.  Written Description                                                                                       
                     The examiner rejected claims 72-105 under 35 U.S.C. § 112, first paragraph, for                        
              lack of adequate written description; that is, being based on new matter.  The examiner                       
              argued that “the specification does not describe or discuss ‘a computer program                               
              comprising instructions which direct a processor to analyze data derived from use of                          
              said reagents.”  Examiner’s Answer, paragraph bridging pages 3 and 4.  See also page                          
              6:  “The concept of ‘a computer program comprising instructions which direct a                                
              processor to analyze data derived from use of said reagents’ does not appear to be part                       
              of the originally filed invention.”                                                                           
                     However, on page 4 of the Examiner’s Answer, the examiner quotes the                                   
              following passage from the specification:  “In some embodiments, a computer-based                             
              analysis program is used to translate the raw data generated by the genomic profile                           
              (e.g., the presence or absence of a given SNP or mutation) into data of predictive value                      
              for the clinician (e.g., probability of abnormal pharmacological response, presence of                        
              underlying disease, or differential diagnosis of known disease)” (emphases added).                            
              While this passage does not use precisely the same words as claim 72, we agree with                           
              Appellant that it reasonably describes the limitation recited in the claim.                                   





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