Ex Parte Herz et al - Page 3


            Appeal No. 2006-2556                                                       Page 3              
            Application No. 09/977,155                                                                     

                  C-terminal tail, and (ii) a protease which specifically cleaves the domain and           
                  thereby releases the tail from the membrane;                                             
                         b) incubating the sample under conditions wherein the protease cleaves            
                  the domain and thereby releases the tail from the membrane; and                          
                         c) detecting a resultant released tail, which indicates proteolysis of the        
                  LDL receptor transmembrane domain.                                                       
                  15.  A method according to claim 1, wherein the LDL receptor is LRP1b and                
                  the protease is native to the membrane.                                                  
                  Thus, claim 1 is directed to a method for assaying the proteolysis of an LDL             
            receptor transmembrane domain by detecting the release of the C-terminal tail from the         
            remainder of the membrane-bound protein.                                                       
                  The method involves incubating a cell membrane that contains a protease and              
            an LDL receptor transmembrane domain fused to a C-terminal tail, under conditions that         
            allow the protease to cleave the transmembrane domain and release the C-terminal tail          
            from the membrane.  Detection of the released tail indicates that the proteolytic              
            cleavage has occurred.                                                                         
                  Claim 15 limits the process of claim 1 to one in which a specific LDL receptor           
            (LRP1b) is cleaved and the protease is one that is native to the membrane.                     
            2.  Anticipation by Willnow                                                                    
                  Claims 1-9 and 11-14 stand rejected under 35 U.S.C. § 102(b) as being                    
            anticipated by Willnow.1                                                                       
                  The examiner points out that Willnow teaches “methods involving LRP-                     
            mini[]receptors,” which are truncated versions of the low density lipoprotein receptor-        

                                                                                                           
            1 Willnow et al., “Molecular Dissection of Ligand Binding Sites on the Low Density Lipoprotein Receptor-
            related Protein,” The Journal of Biological Chemistry, Vol. 269, No. 22, pp. 15827-15832 (1994).





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