Ex Parte Runge et al - Page 7

               Appeal 2007-0582                                                                             
               Application 09/832,069                                                                       

               the amount of mitochondrial DNA damage:  the Specification states that                       
               increased mitochondrial DNA damage indicates increased oxidative stress.                     
               The Examiner has not adequately explained why the correlations shown in                      
               the working examples do not allow those skilled in the art to the make type                  
               of qualitative determination (normal range vs. abnormal) that is required to                 
               practice the claimed method.                                                                 
                      The Examiner also argues that the effect of a given mutation is                       
               unpredictable:  depending on its type and location, a mutation can                           
               completely abolish the function of a gene product or it can have no effect at                
               all (Answer 5).  Because a given mutation can have a range of effects on                     
               mRNA production, protein production, etc., the Examiner concludes that                       
               measuring such “downstream” effects cannot be relied on to measure the                       
               amount of DNA damage (id. at 5-6).                                                           
                      We agree with Appellants that the Examiner’s concern is misplaced.                    
               As Appellants have pointed out,                                                              
                      [w]here  there  is  a population  of  mitochondria  being  tested                     
                      (which there certainly would be if one were testing a blood                           
                      sample or blood products as stated by the claim), there would                         
                      necessarily  be  a  vast  range  of  mutations  occurring  in  the                    
                      mitochondria, some within coding regions and some outside of                          
                      a particular coding region.  Nevertheless, the distribution would                     
                      be  expected  to  be  random  and  thus  demonstrate  a  readily                      
                      identifiable correlation between the amount of damage in any                          
                      one  gene,  as  measured  by  expression  of  that  gene,  and  the                   
                      amount of damage overall.                                                             
               (Br. 9.)  We agree with Appellants’ analysis, and note that it is supported by               
               the correlations demonstrated in the Specification’s working examples.                       



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