Ex Parte Abo et al - Page 3

                Appeal 2007-4214                                                                             
                Application 10/330,372                                                                       
                      to their length they do not meet the limitation of being about or                      
                      greater than 95% identical to SEQ ID NO:2.                                             
                (Answer 4.)                                                                                  
                      The Examiner relies on an alignment of SEQ ID NO: 2 with SEQ ID                        
                NOs: 6, 7, 8, 9, 12, and 13 performed at the PTO using the Smith-Waterman                    
                algorithm.                                                                                   
                      We could not find, however, the above evidence relied upon by the                      
                Examiner in the electronic administrative file.  Since such evidence appears                 
                to be critical to the Examiner’s analysis, the application is being remanded to              
                the Examiner to have the alignment scanned into the electronic application.                  
                We also direct the Examiner’s attention to the following comments.                           
                      Basically, the Examiner’s position appears to be that the percentage of                
                sequence identity may only be calculated by using the total number of                        
                residues in SEQ ID NO: 2 (Answer 7).  Using that definition, according to                    
                the Examiner, aligning SEQ ID NO:2 with SEQ ID NO:6 “results in 32                           
                residues being identical divided by the total number of residues in SEQ ID                   
                NO:2 (236 residues) and multiplied by 100% that equals 13.6%.”  (Id.)                        
                      “The test for definiteness is whether one skilled in the art would                     
                understand the bounds of the claim when read in light of the specification.”                 
                Miles Laboratories, Inc. v. Shandon, Inc., 997 F.2d 870, 875, 27 USPQ2d                      
                1123, 1126 (Fed. Cir. 1993).  Claims are in compliance with 35 U.S.C. §                      
                112, second paragraph, if “the claims, read in light of the specification,                   
                reasonably apprise those skilled in the art and are as precise as the subject                
                matter permits.”  Hybritech, Inc. v. Monoclonal Antibodies, Inc., 802 F.2d                   
                1367, 1385, 231 USPQ 81, 94-95 (Fed. Cir. 1987).  Moreover, it is                            
                axiomatic that Appellants may act as their own lexicographer.  See Merck &                   

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