Ex Parte Baker et al - Page 7

              Appeal No. 2007-0057                                                                  
              Application No. 10/174,586                                                            

                    We agree with the Examiner that the evidence shows that, despite the            
              overall similarity of PRO270 and thioredoxin, PRO270 is unlikely to have              
              the same activity as thioredoxin.  Therefore, thioredoxin’s activity cannot be        
              relied on as a basis for the patentable utility of PRO270.                            
                    Appellants argue that “members of the thioredoxin family (1) have a             
              specific function in mediating the transfer of electrons and (2) that this            
              mediation has been shown to be applicable to a variety of specific                    
              therapeutic purposes.”  (Br. 12.)  Appellants argue that Holmgren teaches             
              that thioredoxin was known to function in electron transfer via reversible            
              oxidation of two vicinal –SH groups.  (Id. at 13.)  Appellants also cite Sen,3        
              as teaching that thioredoxin has “specific effects on gene expression, for            
              example, by regulating the transcription factor NF-κB.”  (Id.)  Finally,              
              Appellants rely on Gallegos4 for its teaching that transfection of human              
              breast cancer cells with a dominant-negative mutant of thioredoxin reverses           
              the transformed phenotype.  (Id.)                                                     
                    The utilities relied on by Appellants are based on thioredoxin’s                
              activity in electron transfer and regulation of the oxidation-reduction (redox)       
              state.  Those activities, in turn, rely on the reversible oxidation of the two        
              cysteine residues in thioredoxin’s active site.  Since PRO270 lacks those             
              cysteine residues, it is unlikely to share thioredoxin’s electron transfer and        

                                                                                                   
              3 Sen et al., “Antioxidant and redox regulation of gene transcription,”               
              FASEB J., Vol. 10, pp. 709-720 (1996).                                                
              4 Gallegos et al., “Transfection with human thioredoxin increases cell                
              proliferation and a dominant-negative mutant thioredoxin reverses the                 
              transformed phenotype of human breast cancer cells,” Cancer Research,                 
              Vol. 56, pp. 5765-5770 (1996).                                                        
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